Package: lemna 1.0.1
lemna: Lemna Ecotox Effect Model
The reference implementation of model equations and default parameters for the toxicokinetic-toxicodynamic (TKTD) model of the Lemna (duckweed) aquatic plant. Lemna is a standard test macrophyte used in ecotox effect studies. The model was described and published by the SETAC Europe Interest Group Effect Modeling. It is a refined description of the Lemna TKTD model published by Schmitt et al. (2013) <doi:10.1016/j.ecolmodel.2013.01.017>.
Authors:
lemna_1.0.1.tar.gz
lemna_1.0.1.zip(r-4.5)lemna_1.0.1.zip(r-4.4)lemna_1.0.1.zip(r-4.3)
lemna_1.0.1.tgz(r-4.4-x86_64)lemna_1.0.1.tgz(r-4.4-arm64)lemna_1.0.1.tgz(r-4.3-x86_64)lemna_1.0.1.tgz(r-4.3-arm64)
lemna_1.0.1.tar.gz(r-4.5-noble)lemna_1.0.1.tar.gz(r-4.4-noble)
lemna_1.0.1.tgz(r-4.4-emscripten)lemna_1.0.1.tgz(r-4.3-emscripten)
lemna.pdf |lemna.html✨
lemna/json (API)
NEWS
| # Install 'lemna' in R: |
| install.packages('lemna', repos = c('https://nkehrein.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/nkehrein/lemna/issues
- focusd1 - A Lemna scenario using FOCUS D1 Ditch environmental conditions
- focusd2 - A Lemna scenario using FOCUS D2 Ditch environmental conditions
- focusr3 - A Lemna scenario using FOCUS R3 Stream environmental conditions
- hommen212 - Observed frond numbers reported by Hommen _et al._
- metsulfuron - A Lemna scenario fitted to metsulfuron-methyl effect data
- schmitt77 - Observed frond numbers reported by Schmitt _et al._
Last updated 1 months agofrom:0f81e7ea97. Checks:OK: 7 NOTE: 2. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Nov 14 2024 |
| R-4.5-win-x86_64 | NOTE | Nov 14 2024 |
| R-4.5-linux-x86_64 | NOTE | Nov 14 2024 |
| R-4.4-win-x86_64 | OK | Nov 14 2024 |
| R-4.4-mac-x86_64 | OK | Nov 14 2024 |
| R-4.4-mac-aarch64 | OK | Nov 14 2024 |
| R-4.3-win-x86_64 | OK | Nov 14 2024 |
| R-4.3-mac-x86_64 | OK | Nov 14 2024 |
| R-4.3-mac-aarch64 | OK | Nov 14 2024 |
Exports:effectlemnalemna_desolvenew_lemna_scenarioparam_defaultsparam_new
Dependencies:clicolorspacedeSolvefansifarverggplot2gluegridExtragtableisobandlabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmepillarpkgconfigR6RColorBrewerrlangscalestibbleutf8vctrsviridisLitewithr
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Effects on biomass | effect effect.default effect.lemna_scenario |
| A Lemna scenario using FOCUS D1 Ditch environmental conditions | focusd1 |
| A Lemna scenario using FOCUS D2 Ditch environmental conditions | focusd2 |
| A Lemna scenario using FOCUS R3 Stream environmental conditions | focusr3 |
| Observed frond numbers reported by Hommen _et al._ (2015) | hommen212 |
| Simulate a Lemna scenario | lemna lemna.default lemna.lemna_scenario |
| Access to the ODE solver | lemna_desolve |
| A Lemna scenario fitted to metsulfuron-methyl effect data | metsulfuron |
| Lemna scenario constructor | new_lemna_scenario |
| Default parameters | param_defaults param_new |
| Plot a Lemna scenario result | plot.lemna_result |
| Observed frond numbers reported by Schmitt _et al._ (2013) | schmitt77 |
